Methods of detecting the Human Paplillomavirus 
      Over the years a wide range of methods have been developed  for detecting human papillomavirus infection. The methods vary in their  sensitivity and their ability to identify individual human papillomavirus  types. Thus, some are appropriate for use in routine clinical practice (e.g.: colposcopy,  cytology) while others (e.g.  immunocyto-  histochemical methods, DNA hybridisation) have an important role in  screening  and research. 
       The methods and their  uses and limitations are described below 
      
        
          
            
              Methods of detection of human  papillomavirus infection  
                  -  Examination of skin or other tissue with       naked eye.
 
                    -  Magnified images of skin or mucous       membrane  of the    genital tract  using the colposcope  
 
                    -  Morphological studies of histological       sections  or cervical  smears 
 
                    - Immunocytochemical       staining of histological and cytological specimens
 
                    - Electron       microscopy of warty lesions 
 
                    - DNA       hybridisation using PCR or Hybrid Capture 2 
 
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      Classically, HPVs produce benign  warty lesions of squamous epithelium which can be recognised macroscopically  with the naked eye. The most common sites for these exophytic lesions are the  skin (usually the hand) and the external genitalia. These lesions are highly infectious  but are self limiting and usually regress spontaneously. 
      Colposcopy permits the  detection of subclinical infections not normally visible to the naked  eye. After the application of acetic acid the cervix assumes a shiny white  appearance with an irregular outline and satellite lesions may be seen. Unless  condylomatous changes are present the pattern may be difficult to distinguish  from CIN  (Insert Fig 1 COLPSCOPY HPV CERVIX).
      
          Histological specimens are  characterised by the presence of koilocytosis, individual cell keratinisation,  parakeratosis, acanthosis and multinucleation. 
      
        (Insert Fig 2 HISTOLOGY HPV  CERVIX) These changes are reflected in the cytological specimens (Insert Fig3CYTOLOGY HPV CERVIX).  However neither colposcopy, histology,  cytology nor immunological staining permit HPV typing or detection of virus  integration and do not reveal latent infection.
        
        (Insert Fig 4Fig 4 IMMUNOCYTOCHEMICAL STAINING OF CERVIX) 
      Electron microscopy can be used  to demonstrate papillomavirus particles in scrapings of exophytic warts but the  method is rarely used as complete virus particles are scanty. A satisfactory  method of virus culture has not been developed
      DNA analysis has become the method of choice because of the  limitations of other diagnostic method. The most satisfactory tests for HPV rely on the  detection of viral DNA.  Since all HPV types are closely related, assays can be   designed to target conserved regions of the  genome to discriminate between different  HPV types. Hybrid capture provides a viral profile of a number of different HPV types  which can then be further identified using the polymerase chain reaction (PCR). PCR  based method use a selection of consensus primers to identify specific  types of HPV.   Hybrid Capture 2 (Digene Diagnostics,  Gaithersburg,   MD, USA) has recently been approved by  the American Food and Drug Agency (FDA) as an adjunct to cytology screening of  women aged 30 years and older. It is generally accepted that both PCR and HC2  reliably detect high –risk and other types of HPV in clinical samples 
      JOSHUA: Could you create a flow  diagram to illustrate the key stage of Hybrid capture here . Also a flow  diagram of PCR assay would be helpful. See text pp503 
       (For further  reading see  Denny  LA and Wright TC in  Best Practice and Research in Clinical  Obstetrics and  Gynaecology2005  vol 19,no4,pp501-505 Also available on line  at http://www.sciencedirect.com ).